文献阅读 - 随笔分类 - esctrionsit

文献阅读 | The haplotype-based analysis of Aegilops tauschii introgression into hard red winter wheat and its impact on productivity traits

摘要：https://doi.org/10.1101/2021.05.29.446303 这篇发表在bioRxiv上的文章是2020年发表于G3上的一篇文章（[10.1534/g3.120.401479](https: //doi.org/10.1534/g3.120.401479)）的后续。野生近缘种阅读全文

posted @ 2021-08-30 00:04 esctrionsit 阅读(363) 评论(0) 推荐(0)

文献阅读 | Parent-independent genotyping for constructing an ultrahigh-density linkage map based on population sequencing

摘要：Xie, W., Feng, Q., Yu, H., Huang, X., Zhao, Q., Xing, Y., Yu, S., Han, B., & Zhang, Q. (2010). Parent-independent genotyping for constructing an ultra 阅读全文

posted @ 2021-07-12 00:07 esctrionsit 阅读(237) 评论(0) 推荐(0)

文献阅读 | Rapid genotype imputation from sequence with reference panels

摘要：Davies, R. W., Kucka, M., Su, D., Shi, S., Flanagan, M., Cunniff, C. M., Chan, Y. F., & Myers, S. (2021). Rapid genotype imputation from sequence with 阅读全文

posted @ 2021-07-04 17:18 esctrionsit 阅读(918) 评论(0) 推荐(0)

文献阅读 | The wheat and barley vernalization gene VRN3 is an orthologue of FT

摘要：Yan L, Fu D, Li C, Blechl A, Tranquilli G, Bonafede M, Sanchez A, Valarik M, Yasuda S, Dubcovsky J. The wheat and barley vernalization gene VRN3 is an 阅读全文

posted @ 2021-06-27 23:19 esctrionsit 阅读(832) 评论(0) 推荐(0)

文献阅读 | Optimized sample selection for cost-efficient long-read population sequencing

摘要：Ranallo-Benavidez T R, Lemmon Z, Soyk S, et al. Optimized sample selection for cost-efficient long-read population sequencing[J]. Genome Research, 202 阅读全文

posted @ 2021-06-21 00:14 esctrionsit 阅读(176) 评论(0) 推荐(0)

文献阅读 | PlantDeepSEA, a deep learning-based web service to predict the regulatory effects of genomic variants in plants

摘要：Hu Zhao, Zhuo Tu, Yinmeng Liu, Zhanxiang Zong, Jiacheng Li, Hao Liu, Feng Xiong, Jinling Zhan, Xuehai Hu, Weibo Xie, PlantDeepSEA, a deep learning-bas 阅读全文

posted @ 2021-06-06 23:58 esctrionsit 阅读(437) 评论(0) 推荐(0)

文献阅读 | Introgressing the Aegilops tauschii genome into wheat as a basis for cereal improvement

摘要：Zhou, Y., Bai, S., Li, H. et al. Introgressing the Aegilops tauschii genome into wheat as a basis for cereal improvement. Nat. Plants (2021). https:// 阅读全文

posted @ 2021-05-30 23:40 esctrionsit 阅读(693) 评论(0) 推荐(0)

文献阅读 | The landscape of gene–CDS–haplotype diversity in rice: Properties, population organization, footprints of domestication and breeding, and implications for genetic improvement

摘要：Zhang F, Wang C, Li M, et al. The landscape of gene–CDS–haplotype diversity in rice: Properties, population organization, footprints of domestication 阅读全文

posted @ 2021-05-24 00:47 esctrionsit 阅读(775) 评论(0) 推荐(0)

文献阅读 | Network medicine framework for identifying drug-repurposing opportunities for COVID-19

摘要：Gysi, Deisy Morselli, et al. "Network medicine framework for identifying drug-repurposing opportunities for COVID-19." Proceedings of the National Aca 阅读全文

posted @ 2021-05-09 21:34 esctrionsit 阅读(542) 评论(0) 推荐(0)

文献阅读 | Population genomics and haplotype analysis in spelt and bread wheat identifies a gene regulating glume color

摘要：Abrouk, M., Athiyannan, N., Müller, T. et al. Population genomics and haplotype analysis in spelt and bread wheat identifies a gene regulating glume c 阅读全文

posted @ 2021-04-25 22:42 esctrionsit 阅读(597) 评论(0) 推荐(0)

文献阅读 | High-resolution genetic mapping of maize pan-genome sequence anchors

摘要：Lu, F., Romay, M., Glaubitz, J. et al. High-resolution genetic mapping of maize pan-genome sequence anchors. Nat Commun 6, 6914 (2015). https://doi.or 阅读全文

posted @ 2021-04-18 22:06 esctrionsit 阅读(241) 评论(0) 推荐(0)

文献阅读 | Identifying barley pan-genome sequence anchors using genetic mapping and machine learning

摘要：Gao, S., Wu, J., Stiller, J. et al. Identifying barley pan-genome sequence anchors using genetic mapping and machine learning. Theor Appl Genet 133, 2 阅读全文

posted @ 2021-04-11 23:53 esctrionsit 阅读(432) 评论(0) 推荐(0)

文献阅读 | Analysis of the recombination landscape of hexaploid bread wheat reveals genes controlling recombination and gene conversion frequency

摘要：Gardiner, LJ., Wingen, L.U., Bailey, P. et al. Analysis of the recombination landscape of hexaploid bread wheat reveals genes controlling recombinatio 阅读全文

posted @ 2021-03-28 23:36 esctrionsit 阅读(191) 评论(0) 推荐(0)

文献阅读 | Novel approach for parallelizing pairwise comparison problems as applied to detecting segments identical by decent in whole-genome data

摘要：Sapin, Keller (2021) Novel Approach for Parallelizing Pairwise Comparison Problems as Applied to Detecting Segments Identical By Decent in Whole-Genom 阅读全文

posted @ 2021-03-22 00:01 esctrionsit 阅读(88) 评论(0) 推荐(0)

文献阅读 | Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

摘要：Krogh, A., Larsson, B., Von Heijne, G., & Sonnhammer, E. L. (2001). Predicting transmembrane protein topology with a hidden Markov model: application 阅读全文

posted @ 2021-03-14 16:59 esctrionsit 阅读(529) 评论(0) 推荐(0)

文献阅读 | Comprehensive genotyping of the USA national maize inbred seed bank

摘要：Romay, M.C., Millard, M.J., Glaubitz, J.C. et al. Comprehensive genotyping of the USA national maize inbred seed bank. Genome Biol 14, R55 (2013). htt 阅读全文

posted @ 2021-03-07 22:39 esctrionsit 阅读(135) 评论(0) 推荐(0)

文献阅读 | Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses

摘要：Liang, Z., Duan, S., Sheng, J. et al. Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses. Nat 阅读全文

posted @ 2021-01-31 18:12 esctrionsit 阅读(1228) 评论(0) 推荐(0)

文献阅读 | Discovery of beneficial haplotypes for complex traits in maize landraces

摘要：Mayer, M., Hölker, A.C., González-Segovia, E. et al. Discovery of beneficial haplotypes for complex traits in maize landraces. Nat Commun 11, 4954 (20 阅读全文

posted @ 2021-01-25 02:18 esctrionsit

文献阅读 | Improving and Maintaining Winter Hardiness and Frost Tolerance in Bread Wheat by Genomic Selection

摘要：Michel, S., Löschenberger, F., Hellinger, J., Strasser, V., Ametz, C., Pachler, B., ... & Bürstmayr, H. (2019). Improving and maintaining winter hardi 阅读全文

posted @ 2021-01-18 01:17 esctrionsit 阅读(197) 评论(0) 推荐(0)

文献阅读 | A new decade and new data at SoyBase, the USDA-ARS soybean genetics and genomics database

摘要：Anne V Brown, Shawn I Conners, Wei Huang, Andrew P Wilkey, David Grant, Nathan T Weeks, Steven B Cannon, Michelle A Graham, Rex T Nelson, A new decade 阅读全文

posted @ 2021-01-11 01:54 esctrionsit 阅读(1359) 评论(0) 推荐(0)

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