emanlee - 博客园

2020年8月29日

摘要： https://pypi.org/project/dask/ [root@ibiomed lib-dynload]# pip install daskCollecting dask Downloading dask-2.25.0-py3-none-any.whl (834 kB) |████████ 阅读全文

posted @ 2020-08-29 21:39 emanlee 阅读(894) 评论(0) 推荐(0)

nanopolish 安装使用

摘要： https://github.com/jts/nanopolish nanopolish Software package for signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate a 阅读全文

posted @ 2020-08-29 21:21 emanlee 阅读(1458) 评论(0) 推荐(0)

h5py

摘要： HDF5 for Python h5py is a thin, pythonic wrapper around the HDF5, which runs on Python 3 (3.6+). Websites Main website: https://www.h5py.org Source co 阅读全文

posted @ 2020-08-29 21:18 emanlee 阅读(405) 评论(0) 推荐(0)

Sam2Tsv 安装使用

摘要：官网 http://lindenb.github.io/jvarkit/Sam2Tsv.html 下载安装 $ git clone "https://github.com/lindenb/jvarkit.git"$ cd jvarkit$ ./gradlew sam2tsv Example $ ja 阅读全文

posted @ 2020-08-29 21:13 emanlee 阅读(575) 评论(0) 推荐(0)

samtools 安装使用

摘要：官网： https://github.com/samtools/samtools https://github.com/samtools/samtools/releases https://github.com/samtools/samtools/blob/develop/INSTALL 安装： w 阅读全文

posted @ 2020-08-29 21:10 emanlee 阅读(2807) 评论(0) 推荐(0)

minimap2安装使用

摘要：官网： https://github.com/lh3/minimap2 https://github.com/lh3/minimap2/releases/tag/v2.17 Download and install: wget https://github.com/lh3/minimap2/rele 阅读全文

posted @ 2020-08-29 20:57 emanlee 阅读(5060) 评论(0) 推荐(0)

2020年8月28日

linux CentOS ModuleNotFoundError: No module named '_ctypes

摘要： Yes that worked for me, I made sure these packages are installed on my Centos 7: sudo yum install -y zlib-devel bzip2-devel openssl-devel ncurses-deve 阅读全文

posted @ 2020-08-28 20:49 emanlee 阅读(1562) 评论(0) 推荐(0)

centos 卸载 miniconda3

摘要：找到miniconda3的文件夹，使用rm命令将它删除：然后，用vim命令进入.bashrc文件，将conda的语句用#注释掉最后，重新激活一下source .bashrc就可以了。阅读全文

posted @ 2020-08-28 17:13 emanlee 阅读(1711) 评论(0) 推荐(0)

centos7 python2和python3共存

摘要： ln -s /usr/local/python3/bin/python3 /usr/bin/python # 测试 [root@operation bin]# pip3 -V pip 18.1 from /usr/local/python3/lib/python3.6/site-packages/p 阅读全文

posted @ 2020-08-28 16:17 emanlee 阅读(211) 评论(0) 推荐(0)

Python机器学习库sklearn的安装（scikit-learn）

摘要： pip install -U scikit-learn yum -y install gcc gcc-c++ (如果已经安装gcc跳过此步骤) yum -y install numpy python-devel scipy python3 -m pip install scikit-learn 阅读全文

posted @ 2020-08-28 15:37 emanlee 阅读(1053) 评论(0) 推荐(0)