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pytorch之dataloader深入剖析

- dataloader本质是一个可迭代对象,使用iter()访问,不能使用next()访问;

- 使用iter(dataloader)返回的是一个迭代器,然后可以使用next访问;

- 也可以使用`for inputs, labels in dataloaders`进行可迭代对象的访问;

- 一般我们实现一个datasets对象,传入到dataloader中;然后内部使用yeild返回每一次batch的数据;

① DataLoader本质上就是一个iterable(跟python的内置类型list等一样),并利用多进程来加速batch data的处理,使用yield来使用有限的内存
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② Queue的特点

当队列里面没有数据时: queue.get() 会阻塞, 阻塞的时候,其它进程/线程如果有queue.put() 操作,本线程/进程会被通知,然后就可以 get 成功。
当数据满了: queue.put() 会阻塞

③ DataLoader是一个高效,简洁,直观的网络输入数据结构,便于使用和扩展

输入数据PipeLine
pytorch 的数据加载到模型的操作顺序是这样的:

① 创建一个 Dataset 对象
② 创建一个 DataLoader 对象
③ 循环这个 DataLoader 对象,将img, label加载到模型中进行训练

dataset = MyDataset()
dataloader = DataLoader(dataset)
num_epoches = 100
for epoch in range(num_epoches):
    for img, label in dataloader:
        ....
所以,作为直接对数据进入模型中的关键一步, DataLoader非常重要。

首先简单介绍一下DataLoader,它是PyTorch中数据读取的一个重要接口,该接口定义在dataloader.py中,只要是用PyTorch来训练模型基本都会用到该接口(除非用户重写…),该接口的目的:将自定义的Dataset根据batch size大小、是否shuffle等封装成一个Batch Size大小的Tensor,用于后面的训练。

官方对DataLoader的说明是:“数据加载由数据集和采样器组成,基于python的单、多进程的iterators来处理数据。”关于iterator和iterable的区别和概念请自行查阅,在实现中的差别就是iterators有__iter__和__next__方法,而iterable只有__iter__方法。

1.DataLoader

先介绍一下DataLoader(object)的参数:

    dataset(Dataset): 传入的数据集
    batch_size(int, optional): 每个batch有多少个样本
    shuffle(bool, optional): 在每个epoch开始的时候,对数据进行重新排序
    sampler(Sampler, optional): 自定义从数据集中取样本的策略,如果指定这个参数,那么shuffle必须为False
    batch_sampler(Sampler, optional): 与sampler类似,但是一次只返回一个batch的indices(索引),需要注意的是,一旦指定了这个参数,那么batch_size,shuffle,sampler,drop_last就不能再制定了(互斥——Mutually exclusive)
    num_workers (int, optional): 这个参数决定了有几个进程来处理data loading。0意味着所有的数据都会被load进主进程。(默认为0)
    collate_fn (callable, optional): 将一个list的sample组成一个mini-batch的函数
    pin_memory (bool, optional): 如果设置为True,那么data loader将会在返回它们之前,将tensors拷贝到CUDA中的固定内存(CUDA pinned memory)中.

    drop_last (bool, optional): 如果设置为True:这个是对最后的未完成的batch来说的,比如你的batch_size设置为64,而一个epoch只有100个样本,那么训练的时候后面的36个就被扔掉了…
    如果为False(默认),那么会继续正常执行,只是最后的batch_size会小一点。

    timeout(numeric, optional): 如果是正数,表明等待从worker进程中收集一个batch等待的时间,若超出设定的时间还没有收集到,那就不收集这个内容了。这个numeric应总是大于等于0。默认为0
    worker_init_fn (callable, optional): 每个worker初始化函数 If not None, this will be called on each
    worker subprocess with the worker id (an int in [0, num_workers - 1]) as
    input, after seeding and before data loading. (default: None) 

- 首先dataloader初始化时得到datasets的采样list

class DataLoader(object):
    r"""
    Data loader. Combines a dataset and a sampler, and provides
    single- or multi-process iterators over the dataset.

    Arguments:
        dataset (Dataset): dataset from which to load the data.
        batch_size (int, optional): how many samples per batch to load
            (default: 1).
        shuffle (bool, optional): set to ``True`` to have the data reshuffled
            at every epoch (default: False).
        sampler (Sampler, optional): defines the strategy to draw samples from
            the dataset. If specified, ``shuffle`` must be False.
        batch_sampler (Sampler, optional): like sampler, but returns a batch of
            indices at a time. Mutually exclusive with batch_size, shuffle,
            sampler, and drop_last.
        num_workers (int, optional): how many subprocesses to use for data
            loading. 0 means that the data will be loaded in the main process.
            (default: 0)
        collate_fn (callable, optional): merges a list of samples to form a mini-batch.
        pin_memory (bool, optional): If ``True``, the data loader will copy tensors
            into CUDA pinned memory before returning them.
        drop_last (bool, optional): set to ``True`` to drop the last incomplete batch,
            if the dataset size is not divisible by the batch size. If ``False`` and
            the size of dataset is not divisible by the batch size, then the last batch
            will be smaller. (default: False)
        timeout (numeric, optional): if positive, the timeout value for collecting a batch
            from workers. Should always be non-negative. (default: 0)
        worker_init_fn (callable, optional): If not None, this will be called on each
            worker subprocess with the worker id (an int in ``[0, num_workers - 1]``) as
            input, after seeding and before data loading. (default: None)

    .. note:: By default, each worker will have its PyTorch seed set to
              ``base_seed + worker_id``, where ``base_seed`` is a long generated
              by main process using its RNG. However, seeds for other libraies
              may be duplicated upon initializing workers (w.g., NumPy), causing
              each worker to return identical random numbers. (See
              :ref:`dataloader-workers-random-seed` section in FAQ.) You may
              use ``torch.initial_seed()`` to access the PyTorch seed for each
              worker in :attr:`worker_init_fn`, and use it to set other seeds
              before data loading.

    .. warning:: If ``spawn`` start method is used, :attr:`worker_init_fn` cannot be an
                 unpicklable object, e.g., a lambda function.
    """

    __initialized = False

    def __init__(self, dataset, batch_size=1, shuffle=False, sampler=None, batch_sampler=None,
                 num_workers=0, collate_fn=default_collate, pin_memory=False, drop_last=False,
                 timeout=0, worker_init_fn=None):
        self.dataset = dataset
        self.batch_size = batch_size
        self.num_workers = num_workers
        self.collate_fn = collate_fn
        self.pin_memory = pin_memory
        self.drop_last = drop_last
        self.timeout = timeout
        self.worker_init_fn = worker_init_fn

        if timeout < 0:
            raise ValueError('timeout option should be non-negative')

        if batch_sampler is not None:
            if batch_size > 1 or shuffle or sampler is not None or drop_last:
                raise ValueError('batch_sampler option is mutually exclusive '
                                 'with batch_size, shuffle, sampler, and '
                                 'drop_last')
            self.batch_size = None
            self.drop_last = None

        if sampler is not None and shuffle:
            raise ValueError('sampler option is mutually exclusive with '
                             'shuffle')

        if self.num_workers < 0:
            raise ValueError('num_workers option cannot be negative; '
                             'use num_workers=0 to disable multiprocessing.')

        if batch_sampler is None:
            if sampler is None:
                if shuffle:
                    sampler = RandomSampler(dataset)  //将list打乱
                else:
                    sampler = SequentialSampler(dataset)
            batch_sampler = BatchSampler(sampler, batch_size, drop_last)

        self.sampler = sampler
        self.batch_sampler = batch_sampler
        self.__initialized = True

    def __setattr__(self, attr, val):
        if self.__initialized and attr in ('batch_size', 'sampler', 'drop_last'):
            raise ValueError('{} attribute should not be set after {} is '
                             'initialized'.format(attr, self.__class__.__name__))

        super(DataLoader, self).__setattr__(attr, val)

    def __iter__(self):
        return _DataLoaderIter(self)

    def __len__(self):
        return len(self.batch_sampler)

其中:RandomSampler,BatchSampler已经得到了采用batch数据的index索引;yield batch机制已经在!!!

class RandomSampler(Sampler):
    r"""Samples elements randomly, without replacement.

    Arguments:
        data_source (Dataset): dataset to sample from
    """

    def __init__(self, data_source):
        self.data_source = data_source

    def __iter__(self):
        return iter(torch.randperm(len(self.data_source)).tolist())

    def __len__(self):
        return len(self.data_source)
class BatchSampler(Sampler):
    r"""Wraps another sampler to yield a mini-batch of indices.

    Args:
        sampler (Sampler): Base sampler.
        batch_size (int): Size of mini-batch.
        drop_last (bool): If ``True``, the sampler will drop the last batch if
            its size would be less than ``batch_size``

    Example:
        >>> list(BatchSampler(SequentialSampler(range(10)), batch_size=3, drop_last=False))
        [[0, 1, 2], [3, 4, 5], [6, 7, 8], [9]]
        >>> list(BatchSampler(SequentialSampler(range(10)), batch_size=3, drop_last=True))
        [[0, 1, 2], [3, 4, 5], [6, 7, 8]]
    """

    def __init__(self, sampler, batch_size, drop_last):
        if not isinstance(sampler, Sampler):
            raise ValueError("sampler should be an instance of "
                             "torch.utils.data.Sampler, but got sampler={}"
                             .format(sampler))
        if not isinstance(batch_size, _int_classes) or isinstance(batch_size, bool) or \
                batch_size <= 0:
            raise ValueError("batch_size should be a positive integeral value, "
                             "but got batch_size={}".format(batch_size))
        if not isinstance(drop_last, bool):
            raise ValueError("drop_last should be a boolean value, but got "
                             "drop_last={}".format(drop_last))
        self.sampler = sampler
        self.batch_size = batch_size
        self.drop_last = drop_last

    def __iter__(self):
        batch = []
        for idx in self.sampler:
            batch.append(idx)
            if len(batch) == self.batch_size:
                yield batch
                batch = []
        if len(batch) > 0 and not self.drop_last:
            yield batch

    def __len__(self):
        if self.drop_last:
            return len(self.sampler) // self.batch_size
        else:
            return (len(self.sampler) + self.batch_size - 1) // self.batch_size

- 其中 _DataLoaderIter(self)输入为一个dataloader对象;如果num_workers=0很好理解,num_workers!=0引入多线程机制,加速数据加载过程;

- 没有多线程时:batch = self.collate_fn([self.dataset[i] for i in indices])进行将index转化为data数据,返回(image,label);self.dataset[i]会调用datasets对象的

__getitem__()方法;

- 多线程下,会为每个线程创建一个索引队列index_queues;共享一个worker_result_queue数据队列!在_worker_loop方法中加载数据;

class _DataLoaderIter(object):
    r"""Iterates once over the DataLoader's dataset, as specified by the sampler"""

    def __init__(self, loader):
        self.dataset = loader.dataset
        self.collate_fn = loader.collate_fn
        self.batch_sampler = loader.batch_sampler
        self.num_workers = loader.num_workers
        self.pin_memory = loader.pin_memory and torch.cuda.is_available()
        self.timeout = loader.timeout
        self.done_event = threading.Event()

        self.sample_iter = iter(self.batch_sampler)

        base_seed = torch.LongTensor(1).random_().item()

        if self.num_workers > 0:
            self.worker_init_fn = loader.worker_init_fn
            self.index_queues = [multiprocessing.Queue() for _ in range(self.num_workers)]
            self.worker_queue_idx = 0
            self.worker_result_queue = multiprocessing.SimpleQueue()
            self.batches_outstanding = 0
            self.worker_pids_set = False
            self.shutdown = False
            self.send_idx = 0
            self.rcvd_idx = 0
            self.reorder_dict = {}

            self.workers = [
                multiprocessing.Process(
                    target=_worker_loop,
                    args=(self.dataset, self.index_queues[i],
                          self.worker_result_queue, self.collate_fn, base_seed + i,
                          self.worker_init_fn, i))
                for i in range(self.num_workers)]

            if self.pin_memory or self.timeout > 0:
                self.data_queue = queue.Queue()
                if self.pin_memory:
                    maybe_device_id = torch.cuda.current_device()
                else:
                    # do not initialize cuda context if not necessary
                    maybe_device_id = None
                self.worker_manager_thread = threading.Thread(
                    target=_worker_manager_loop,
                    args=(self.worker_result_queue, self.data_queue, self.done_event, self.pin_memory,
                          maybe_device_id))
                self.worker_manager_thread.daemon = True
                self.worker_manager_thread.start()
            else:
                self.data_queue = self.worker_result_queue

            for w in self.workers:
                w.daemon = True  # ensure that the worker exits on process exit
                w.start()

            _update_worker_pids(id(self), tuple(w.pid for w in self.workers))
            _set_SIGCHLD_handler()
            self.worker_pids_set = True

            # prime the prefetch loop
            for _ in range(2 * self.num_workers):
                self._put_indices()

    def __len__(self):
        return len(self.batch_sampler)

    def _get_batch(self):
        if self.timeout > 0:
            try:
                return self.data_queue.get(timeout=self.timeout)
            except queue.Empty:
                raise RuntimeError('DataLoader timed out after {} seconds'.format(self.timeout))
        else:
            return self.data_queue.get()

    def __next__(self):
        if self.num_workers == 0:  # same-process loading
            indices = next(self.sample_iter)  # may raise StopIteration
            batch = self.collate_fn([self.dataset[i] for i in indices])
            if self.pin_memory:
                batch = pin_memory_batch(batch)
            return batch

        # check if the next sample has already been generated
        if self.rcvd_idx in self.reorder_dict:
            batch = self.reorder_dict.pop(self.rcvd_idx)
            return self._process_next_batch(batch)

        if self.batches_outstanding == 0:
            self._shutdown_workers()
            raise StopIteration

        while True:
            assert (not self.shutdown and self.batches_outstanding > 0)
            idx, batch = self._get_batch()
            self.batches_outstanding -= 1
            if idx != self.rcvd_idx:
                # store out-of-order samples
                self.reorder_dict[idx] = batch
                continue
            return self._process_next_batch(batch)

    next = __next__  # Python 2 compatibility

    def __iter__(self):
        return self

    def _put_indices(self):
        assert self.batches_outstanding < 2 * self.num_workers
        indices = next(self.sample_iter, None)
        if indices is None:
            return
        self.index_queues[self.worker_queue_idx].put((self.send_idx, indices))
        self.worker_queue_idx = (self.worker_queue_idx + 1) % self.num_workers
        self.batches_outstanding += 1
        self.send_idx += 1

    def _process_next_batch(self, batch):
        self.rcvd_idx += 1
        self._put_indices()
        if isinstance(batch, ExceptionWrapper):
            raise batch.exc_type(batch.exc_msg)
        return batch
def _worker_loop(dataset, index_queue, data_queue, collate_fn, seed, init_fn, worker_id):
    global _use_shared_memory
    _use_shared_memory = True

    # Intialize C side signal handlers for SIGBUS and SIGSEGV. Python signal
    # module's handlers are executed after Python returns from C low-level
    # handlers, likely when the same fatal signal happened again already.
    # https://docs.python.org/3/library/signal.html Sec. 18.8.1.1
    _set_worker_signal_handlers()

    torch.set_num_threads(1)
    random.seed(seed)
    torch.manual_seed(seed)

    if init_fn is not None:
        init_fn(worker_id)

    watchdog = ManagerWatchdog()

    while True:
        try:
            r = index_queue.get(timeout=MANAGER_STATUS_CHECK_INTERVAL)
        except queue.Empty:
            if watchdog.is_alive():
                continue
            else:
                break
        if r is None:
            break
        idx, batch_indices = r
        try:
            samples = collate_fn([dataset[i] for i in batch_indices])
        except Exception:
            data_queue.put((idx, ExceptionWrapper(sys.exc_info())))
        else:
            data_queue.put((idx, samples))
            del samples

- 需要对队列操作,缓存数据,使得加载提速!

 

posted @ 2018-12-16 21:03  ranjiewen  阅读(183436)  评论(5编辑  收藏  举报