chipseq-bam文件转bigwig
点击查看代码
ls -d * | while read id ;do bamCoverage \
-b ${id}/Aligned.sortedByCoord.out.bam \
-o ./${id}.bigwig \
--binSize 10 --normalizeUsing RPKM \
--scaleFactor 1 --numberOfProcessors 16 & \
done
ls -d * | while read id ;do bamCoverage \
-b ${id}/Aligned.sortedByCoord.out.bam \
-o ./${id}.bigwig \
--binSize 10 --normalizeUsing RPKM \
--scaleFactor 1 --numberOfProcessors 16 & \
done