【何之源-21个项目玩转深度学习】——Chapter3-3.2 数据准备-将图像数据转为tfrecord形式
【何之源-21个项目玩转深度学习】——Chapter3-3.2 数据准备-将图像数据转为tfrecord形式
在训练自己的模型前,需要准备数据集,tfrecord作为tensorflow较为流行的数据处理格式,我们需要根据已有的图像样本来制作tfrecord格式的数据源。读者完全可按照下面文件的存放路径,调用以下两个.py文件制作自己的tfrecord文件;
何大神提供的数据源结构如下:
data_prepare/ pic/ train/ wood/ water/ rock/ wetland/ glacier/ urban/ validation/ wood/ water/ rock/ wetland/ glacier/ urban/ src/ tfrecord.py data_convert.py
在data_prepare文件夹下有个pic的文件夹,该文件夹中又包含train文件夹和validation文件夹;在train文件夹中又包含wood,water,rock,wetland,glacier,urban文件夹,这6个文件夹中分别包含各自类型图像800张,尺寸大致为256x256;
同样在validation中也包含那6个文件夹,各目录下存放了200张图像;
运行data_prepare/ 目录下的data_convert.py程序,运行指令是:
python data_convert.py -t pic/ \ --train-shards 2 \ --validation-shards 2 \ --num-threads 2 \ --dataset-name satellite
指令解释如下:
-t pic/ 是指要转换格式的图像文件存放在pic文件夹下;
--train-shards 2 是指将训练图像生成的tfrecord文件分成2份(考虑数据存储的方便,具体分成几份才合理请百度吧,默认是2份)
--validation-shards 2 是指将验证图像生成的tfrecord文件分成2份(默认2)
--num-threads 2 线程数(默认2,注意线程数必须要能整除 train-shards 和 validation-shards,来保证每个线程处理的数据块数是相同的)
--dataset-name satellite 数据集名,默认为satellite(根据读者自己的数据集更改,何大神用的是卫星航拍图,给生成的数据集起一个名字。这里将数据集起名 叫“satellite'’,最后生成文件的开头就是 satellite_train 和 satellite_validation)
data_convert.py的代码如下:
# coding:utf-8 from __future__ import absolute_import import argparse import os import logging from src.tfrecord import main def parse_args(): parser = argparse.ArgumentParser() parser.add_argument('-t', '--tensorflow-data-dir', default='pic/') parser.add_argument('--train-shards', default=2, type=int) parser.add_argument('--validation-shards', default=2, type=int) parser.add_argument('--num-threads', default=2, type=int) parser.add_argument('--dataset-name', default='satellite', type=str) return parser.parse_args() if __name__ == '__main__': logging.basicConfig(level=logging.INFO) args = parse_args() args.tensorflow_dir = args.tensorflow_data_dir args.train_directory = os.path.join(args.tensorflow_dir, 'train') args.validation_directory = os.path.join(args.tensorflow_dir, 'validation') args.output_directory = args.tensorflow_dir args.labels_file = os.path.join(args.tensorflow_dir, 'label.txt') if os.path.exists(args.labels_file) is False: logging.warning('Can\'t find label.txt. Now create it.') all_entries = os.listdir(args.train_directory) dirnames = [] for entry in all_entries: if os.path.isdir(os.path.join(args.train_directory, entry)): dirnames.append(entry) with open(args.labels_file, 'w') as f: for dirname in dirnames: f.write(dirname + '\n') main(args) 读者可根据作者的数据存放目录结构存放数据,然后根据自己的数据集更改名字;其中上面这个.py文件调用了src文件夹中的tfrecord.py文件(其源码如下);
# coding:utf-8 # Copyright 2016 Google Inc. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # ============================================================================== """Converts image data to TFRecords file format with Example protos. The image data set is expected to reside in JPEG files located in the following directory structure. data_dir/label_0/image0.jpeg data_dir/label_0/image1.jpg ... data_dir/label_1/weird-image.jpeg data_dir/label_1/my-image.jpeg ... where the sub-directory is the unique label associated with these images. This TensorFlow script converts the training and evaluation data into a sharded data set consisting of TFRecord files train_directory/train-00000-of-01024 train_directory/train-00001-of-01024 ... train_directory/train-00127-of-01024 and validation_directory/validation-00000-of-00128 validation_directory/validation-00001-of-00128 ... validation_directory/validation-00127-of-00128 where we have selected 1024 and 128 shards for each data set. Each record within the TFRecord file is a serialized Example proto. The Example proto contains the following fields: image/encoded: string containing JPEG encoded image in RGB colorspace image/height: integer, image height in pixels image/width: integer, image width in pixels image/colorspace: string, specifying the colorspace, always 'RGB' image/channels: integer, specifying the number of channels, always 3 image/format: string, specifying the format, always'JPEG' image/filename: string containing the basename of the image file e.g. 'n01440764_10026.JPEG' or 'ILSVRC2012_val_00000293.JPEG' image/class/label: integer specifying the index in a classification layer. start from "class_label_base" image/class/text: string specifying the human-readable version of the label e.g. 'dog' If you data set involves bounding boxes, please look at build_imagenet_data.py. """ from __future__ import absolute_import from __future__ import division from __future__ import print_function from datetime import datetime import os import random import sys import threading import numpy as np import tensorflow as tf import logging def _int64_feature(value): """Wrapper for inserting int64 features into Example proto.""" if not isinstance(value, list): value = [value] return tf.train.Feature(int64_list=tf.train.Int64List(value=value)) def _bytes_feature(value): value=tf.compat.as_bytes(value) return tf.train.Feature(bytes_list=tf.train.BytesList(value=[value])) def _convert_to_example(filename, image_buffer, label, text, height, width): """Build an Example proto for an example. Args: filename: string, path to an image file, e.g., '/path/to/example.JPG' image_buffer: string, JPEG encoding of RGB image label: integer, identifier for the ground truth for the network text: string, unique human-readable, e.g. 'dog' height: integer, image height in pixels width: integer, image width in pixels Returns: Example proto """ colorspace = 'RGB' channels = 3 image_format = 'JPEG' example = tf.train.Example(features=tf.train.Features(feature={ 'image/height': _int64_feature(height), 'image/width': _int64_feature(width), 'image/colorspace': _bytes_feature(colorspace), 'image/channels': _int64_feature(channels), 'image/class/label': _int64_feature(label), 'image/class/text': _bytes_feature(text), 'image/format': _bytes_feature(image_format), 'image/filename': _bytes_feature(os.path.basename(filename)), 'image/encoded': _bytes_feature(image_buffer)})) return example class ImageCoder(object): """Helper class that provides TensorFlow image coding utilities.""" def __init__(self): # Create a single Session to run all image coding calls. self._sess = tf.Session() # Initializes function that converts PNG to JPEG data. self._png_data = tf.placeholder(dtype=tf.string) image = tf.image.decode_png(self._png_data, channels=3) self._png_to_jpeg = tf.image.encode_jpeg(image, format='rgb', quality=100) # Initializes function that decodes RGB JPEG data. self._decode_jpeg_data = tf.placeholder(dtype=tf.string) self._decode_jpeg = tf.image.decode_jpeg(self._decode_jpeg_data, channels=3) def png_to_jpeg(self, image_data): return self._sess.run(self._png_to_jpeg, feed_dict={self._png_data: image_data}) def decode_jpeg(self, image_data): image = self._sess.run(self._decode_jpeg, feed_dict={self._decode_jpeg_data: image_data}) assert len(image.shape) == 3 assert image.shape[2] == 3 return image def _is_png(filename): """Determine if a file contains a PNG format image. Args: filename: string, path of the image file. Returns: boolean indicating if the image is a PNG. """ return '.png' in filename def _process_image(filename, coder): """Process a single image file. Args: filename: string, path to an image file e.g., '/path/to/example.JPG'. coder: instance of ImageCoder to provide TensorFlow image coding utils. Returns: image_buffer: string, JPEG encoding of RGB image. height: integer, image height in pixels. width: integer, image width in pixels. """ # Read the image file. with open(filename, 'rb') as f: # need change r to rb image_data = f.read() # Convert any PNG to JPEG's for consistency. if _is_png(filename): logging.info('Converting PNG to JPEG for %s' % filename) image_data = coder.png_to_jpeg(image_data) # Decode the RGB JPEG. image = coder.decode_jpeg(image_data) # Check that image converted to RGB assert len(image.shape) == 3 height = image.shape[0] width = image.shape[1] assert image.shape[2] == 3 return image_data, height, width def _process_image_files_batch(coder, thread_index, ranges, name, filenames, texts, labels, num_shards, command_args): """Processes and saves list of images as TFRecord in 1 thread. Args: coder: instance of ImageCoder to provide TensorFlow image coding utils. thread_index: integer, unique batch to run index is within [0, len(ranges)). ranges: list of pairs of integers specifying ranges of each batches to analyze in parallel. name: string, unique identifier specifying the data set filenames: list of strings; each string is a path to an image file texts: list of strings; each string is human readable, e.g. 'dog' labels: list of integer; each integer identifies the ground truth num_shards: integer number of shards for this data set. """ # Each thread produces N shards where N = int(num_shards / num_threads). # For instance, if num_shards = 128, and the num_threads = 2, then the first # thread would produce shards [0, 64). num_threads = len(ranges) assert not num_shards % num_threads num_shards_per_batch = int(num_shards / num_threads) shard_ranges = np.linspace(ranges[thread_index][0], ranges[thread_index][1], num_shards_per_batch + 1).astype(int) num_files_in_thread = ranges[thread_index][1] - ranges[thread_index][0] counter = 0 for s in range(num_shards_per_batch): #xrange used only in python 2.X ;so use range instend by csq # Generate a sharded version of the file name, e.g. 'train-00002-of-00010' shard = thread_index * num_shards_per_batch + s output_filename = '%s_%s_%.5d-of-%.5d.tfrecord' % (command_args.dataset_name, name, shard, num_shards) output_file = os.path.join(command_args.output_directory, output_filename) writer = tf.python_io.TFRecordWriter(output_file) shard_counter = 0 files_in_shard = np.arange(shard_ranges[s], shard_ranges[s + 1], dtype=int) for i in files_in_shard: filename = filenames[i] label = labels[i] text = texts[i] image_buffer, height, width = _process_image(filename, coder) example = _convert_to_example(filename, image_buffer, label, text, height, width) writer.write(example.SerializeToString()) shard_counter += 1 counter += 1 if not counter % 1000: logging.info('%s [thread %d]: Processed %d of %d images in thread batch.' % (datetime.now(), thread_index, counter, num_files_in_thread)) sys.stdout.flush() writer.close() logging.info('%s [thread %d]: Wrote %d images to %s' % (datetime.now(), thread_index, shard_counter, output_file)) sys.stdout.flush() shard_counter = 0 logging.info('%s [thread %d]: Wrote %d images to %d shards.' % (datetime.now(), thread_index, counter, num_files_in_thread)) sys.stdout.flush() def _process_image_files(name, filenames, texts, labels, num_shards, command_args): """Process and save list of images as TFRecord of Example protos. Args: name: string, unique identifier specifying the data set filenames: list of strings; each string is a path to an image file texts: list of strings; each string is human readable, e.g. 'dog' labels: list of integer; each integer identifies the ground truth num_shards: integer number of shards for this data set. """ assert len(filenames) == len(texts) assert len(filenames) == len(labels) # Break all images into batches with a [ranges[i][0], ranges[i][1]]. spacing = np.linspace(0, len(filenames), command_args.num_threads + 1).astype(np.int) ranges = [] for i in range(len(spacing) - 1): #xrange used only in python 2.X ;so use range instend by csq ranges.append([spacing[i], spacing[i + 1]]) # Launch a thread for each batch. logging.info('Launching %d threads for spacings: %s' % (command_args.num_threads, ranges)) sys.stdout.flush() # Create a mechanism for monitoring when all threads are finished. coord = tf.train.Coordinator() # Create a generic TensorFlow-based utility for converting all image codings. coder = ImageCoder() threads = [] for thread_index in range(len(ranges)): #xrange used only in python 2.X ;so use range instend by csq args = (coder, thread_index, ranges, name, filenames, texts, labels, num_shards, command_args) t = threading.Thread(target=_process_image_files_batch, args=args) t.start() threads.append(t) # Wait for all the threads to terminate. coord.join(threads) logging.info('%s: Finished writing all %d images in data set.' % (datetime.now(), len(filenames))) sys.stdout.flush() def _find_image_files(data_dir, labels_file, command_args): """Build a list of all images files and labels in the data set. Args: data_dir: string, path to the root directory of images. Assumes that the image data set resides in JPEG files located in the following directory structure. data_dir/dog/another-image.JPEG data_dir/dog/my-image.jpg where 'dog' is the label associated with these images. labels_file: string, path to the labels file. The list of valid labels are held in this file. Assumes that the file contains entries as such: dog cat flower where each line corresponds to a label. We map each label contained in the file to an integer starting with the integer 0 corresponding to the label contained in the first line. Returns: filenames: list of strings; each string is a path to an image file. texts: list of strings; each string is the class, e.g. 'dog' labels: list of integer; each integer identifies the ground truth. """ logging.info('Determining list of input files and labels from %s.' % data_dir) unique_labels = [l.strip() for l in tf.gfile.FastGFile( labels_file, 'r').readlines()] labels = [] filenames = [] texts = [] # Leave label index 0 empty as a background class. """非常重要,这里我们调整label从0开始以符合定义""" label_index = command_args.class_label_base # Construct the list of JPEG files and labels. for text in unique_labels: jpeg_file_path = '%s/%s/*' % (data_dir, text) matching_files = tf.gfile.Glob(jpeg_file_path) labels.extend([label_index] * len(matching_files)) texts.extend([text] * len(matching_files)) filenames.extend(matching_files) if not label_index % 100: logging.info('Finished finding files in %d of %d classes.' % ( label_index, len(labels))) label_index += 1 # Shuffle the ordering of all image files in order to guarantee # random ordering of the images with respect to label in the # saved TFRecord files. Make the randomization repeatable. shuffled_index = list(range(len(filenames))) #add list() by ciky random.seed(12345) random.shuffle(shuffled_index) filenames = [filenames[i] for i in shuffled_index] texts = [texts[i] for i in shuffled_index] labels = [labels[i] for i in shuffled_index] logging.info('Found %d JPEG files across %d labels inside %s.' % (len(filenames), len(unique_labels), data_dir)) # print(labels) return filenames, texts, labels def _process_dataset(name, directory, num_shards, labels_file, command_args): """Process a complete data set and save it as a TFRecord. Args: name: string, unique identifier specifying the data set. directory: string, root path to the data set. num_shards: integer number of shards for this data set. labels_file: string, path to the labels file. """ filenames, texts, labels = _find_image_files(directory, labels_file, command_args) _process_image_files(name, filenames, texts, labels, num_shards, command_args) def check_and_set_default_args(command_args): if not(hasattr(command_args, 'train_shards')) or command_args.train_shards is None: command_args.train_shards = 5 if not(hasattr(command_args, 'validation_shards')) or command_args.validation_shards is None: command_args.validation_shards = 5 if not(hasattr(command_args, 'num_threads')) or command_args.num_threads is None: command_args.num_threads = 5 if not(hasattr(command_args, 'class_label_base')) or command_args.class_label_base is None: command_args.class_label_base = 0 if not(hasattr(command_args, 'dataset_name')) or command_args.dataset_name is None: command_args.dataset_name = '' assert not command_args.train_shards % command_args.num_threads, ( 'Please make the command_args.num_threads commensurate with command_args.train_shards') assert not command_args.validation_shards % command_args.num_threads, ( 'Please make the command_args.num_threads commensurate with ' 'command_args.validation_shards') assert command_args.train_directory is not None assert command_args.validation_directory is not None assert command_args.labels_file is not None assert command_args.output_directory is not None def main(command_args): """ command_args:需要有以下属性: command_args.train_directory 训练集所在的文件夹。这个文件夹下面,每个文件夹的名字代表label名称,再下面就是图片。 command_args.validation_directory 验证集所在的文件夹。这个文件夹下面,每个文件夹的名字代表label名称,再下面就是图片。 command_args.labels_file 一个文件。每一行代表一个label名称。 command_args.output_directory 一个文件夹,表示最后输出的位置。 command_args.train_shards 将训练集分成多少份。 command_args.validation_shards 将验证集分成多少份。 command_args.num_threads 线程数。必须是上面两个参数的约数。 command_args.class_label_base 很重要!真正的tfrecord中,每个class的label号从多少开始,默认为0(在models/slim中就是从0开始的) command_args.dataset_name 字符串,输出的时候的前缀。 图片不可以有损坏。否则会导致线程提前退出。 """ check_and_set_default_args(command_args) logging.info('Saving results to %s' % command_args.output_directory) # Run it! _process_dataset('validation', command_args.validation_directory, command_args.validation_shards, command_args.labels_file, command_args) _process_dataset('train', command_args.train_directory, command_args.train_shards, command_args.labels_file, command_args) 这个源码与何大神提供有差异,考虑本人用的是python3,(何大神用的应该是python2),所以如不做更改会报一些错误。
直接运行
python data_convert.py -t pic/ \ --train-shards 2 \ --validation-shards 2 \ --num-threads 2 \ --dataset-name satellite
可能会报如下错误:
\data_prepare\src\tfrecord.py", line 341, in _find_image_files random.shuffle(shuffled_index) File "F:\Python36\lib\random.py", line 275, in shuffle x[i], x[j] = x[j], x[i] TypeError: 'range' object does not support item assignment
UnicodeDecodeError: 'gbk' codec can't decode byte 0xff in position 0: illegal multibyte sequence
解决方法是做如下几处做更改(我上面给的tfrecord.py代码是做了更改后的):
//第一 def _bytes_feature(value): """Wrapper for inserting bytes features into Example proto.""" value=tf.compat.as_bytes(value)//这行需要添加 (作者给的代码这行没有) return tf.train.Feature(bytes_list=tf.train.BytesList(value=[value]))
//第二 def _process_image(filename, coder): with open(filename, 'rb') as f://这里需要加个b(作者给的源码是‘r’) image_data = f.read()
//第三 xrange需要都改为range
//第四 _find_image_files: shuffled_index = list(range(len(filenames)))//这里加上了list (百度了下说python3中range不返回数组对象,而是返回range对象)
//第五 你的项目路径最好不要有中文,嗯中文路径很多问题的你懂的,拼音也比中文好。
至此,运行指令后会在data_prepare/pic/目录下生成下图5个文件;
其中label,txt中内容是
glacier rock urban water wetland wood 这6类标签名;
而.tfrecord文件中存放的数据是包含图像数据和标签统一存储的二进制文件
tfrecord格式文件使用可参考:https://blog.csdn.net/c20081052/article/details/81315774)
参考:
https://blog.csdn.net/u010412719/article/details/47088095
https://blog.csdn.net/shijing_0214/article/details/51971734
https://blog.csdn.net/dillon2015/article/details/52987792
https://github.com/hzy46/Deep-Learning-21-Examples/issues/28 --------------------- 作者:ciky奇 来源:CSDN 原文:https://blog.csdn.net/c20081052/article/details/81325394 版权声明:本文为博主原创文章,转载请附上博文链接!

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