perseverance combined with energy

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随笔分类 -  bioinfor flat file formats

DSSP Output File
摘要:ColumnsHeaderDefinition1 - 5#Line number7 - 11RESIDUEResidue number, as in PDB file12PDB chain14AASingle letter code amino acid, ! for missing residues, X for non-standard17STRUCTURESecondary structur... 阅读全文

posted @ 2010-04-16 20:36 xiajf 阅读(270) 评论(0) 推荐(0)

GO Annotation Flat File (OBO)
摘要:ColumnContentRequired?Example1DBrequiredSGD2DB_Object_IDrequiredS0000002963DB_Object_SymbolrequiredPHO34QualifieroptionalNOT5REF_IDrequiredGO:00039936DB:Reference (|DB:Reference)requiredPMID:26767097E... 阅读全文

posted @ 2010-04-16 20:36 xiajf 阅读(283) 评论(0) 推荐(0)

Protein Data Bank (PDB)
摘要:ATOM/HETATM line Description of the PDB Atom record, ver 2.2: ColumnsData typeFieldDefinition1 - 6Record name"ATOM "7 - 11IntegerserialAtom serial number.13 - 16AtomnameAtom name.17CharacteraltLocAlte... 阅读全文

posted @ 2010-04-16 20:35 xiajf 阅读(441) 评论(0) 推荐(0)

SwissProt/UniProt
摘要:CodeMeaningDescriptionIDIdentificationContains identifying information and characteristics of the sequenceACAccession number(s)Release-to-release stable identifiersDTDateWhen the entry was created, or... 阅读全文

posted @ 2010-04-16 20:33 xiajf 阅读(443) 评论(0) 推荐(0)