dock 常用命令 和liunx 常用文件操作命令

docker exec -it 890e492ec611 bash  #root下进入docker

docker cp 890e492ec611:/opt/tomcat9/conf/server.xml /home/  #复制

docker cp /home/server.xmla 890e492ec611:/opt/tomcat9/conf/ #复制

docker ps -a #查看所有docker
docker logs -f -t --tail 20 21885eb19249

docker rm 890e492ec611 #docker 删除
docker run -d -p 8180:8180 memesuite/memesuite #docker 启动

docker run -d -p 8088:80 -v /home/docker/gsds_v2/:/app omicsclass/gsds-v2:latest  #挂载
docker exec -ti -u root 890e492ec611 bash #root下进入docker
docker exec -ti -u root 16d275b51196 bash #root下进入docker

chgrp -R meme server.xmla #修改文件组

chown meme:meme web.xml  #修改文件权限

tomcat-users.xml

docker cp 890e492ec611:/opt/tomcat9/conf/tomcat-users.xml /home/

docker cp 890e492ec611:/opt/tomcat9/webapps/ /home/web

docker cp /home/web/webapps/meme_5.4.1/ 890e492ec611:/opt/tomcat9/webapps/meme_5.4.1/

docker cp 890e492ec611:/opt/tomcat9/logs/ /home/web/logs

/home/web/webapps/opal2/WEB-INF

docker cp /home/web/webapps/opal2/WEB-INF 890e492ec611:/opt/tomcat9/webapps/opal2/WEB-INF

docker cp /home/tomcat/tomcat/webapps/meme_5.4.1 890e492ec611:/opt/tomcat9/webapps/meme_5.4.1/
docker cp /home/tomcat/tomcat/webapps/meme_5.4.1.war 890e492ec611:/opt/tomcat9/webapps/meme_5.4.1.war

chown -R meme:meme meme_5.4.1  #修改文件权限及子目录

export CATALINA_BASE=/home/tomcat/tomcat
export CATALINA_HOME=/home/tomcat/tomcat

conda install -c bioconda perl-sys-info
conda install -c bioconda/label/cf201901 perl-sys-info

conda create --prefix /tmp/test-env python=2.7

 

./configure \
--prefix=/opt/meme-5.4.1 \
--enable-web=http://111.201.211.239:8888/opal2/services \
--enable-webservice \
--with-url=http://111.201.211.239:8888/meme-5.4.1

export PATH=$HOME/meme/bin:$HOME/meme/libexec/meme-5.4.1:$PATH

 

To install Sys::Info, copy and paste the appropriate command in to your terminal.

cpanm

cpanm Sys::Info
CPAN shell

perl -MCPAN -e shell
install Sys::Info

 

/home/web/webapps/opal2/WEB-INF

docker cp /home/web/webapps/opal2/WEB-INF 890e492ec611:/opt/tomcat9/webapps/opal2/WEB-INF

docker cp /home/tomcat/tomcat/webapps/meme_5.4.1 890e492ec611:/opt/tomcat9/webapps/meme_5.4.1/
docker cp /home/tomcat/tomcat/webapps/meme_5.4.1.war 890e492ec611:/opt/tomcat9/webapps/meme_5.4.1.war
docker cp /home/tomcat/tomcat/webapps/meme_5.4.1/ 16d275b51196:/opt/tomcat9/webapps/meme_5.4.1/WEB-INF/templates/status.tmpl
docker cp 16d275b51196:/opt/tomcat9/webapps/meme_5.4.1/WEB-INF/templates/status.tmpl /home/perl/status.tmpl
docker cp /home/perl/status.tmpl 16d275b51196:/opt/tomcat9/webapps/meme_5.4.1/WEB-INF/templates/status.tmpl
docker cp /home/perl/meme_5.4.1.war 16d275b51196:/opt/tomcat9/webapps/meme_5.4.1.war
chown -R meme:meme meme_5.4.1

export CATALINA_BASE=/home/tomcat/tomcat
export CATALINA_HOME=/home/tomcat/tomcat

conda install -c bioconda perl-sys-info
conda install -c bioconda/label/cf201901 perl-sys-info

conda create --prefix /tmp/test-env python=2.7