DNA sequence (最长公共子序列)
The twenty-first century is a biology-technology developing century. We know that a gene is made of DNA. The nucleotide bases from which DNA is built are A(adenine), C(cytosine), G(guanine), and T(thymine). Finding the longest common subsequence between DNA/Protein sequences is one of the basic problems in modern computational molecular biology. But this problem is a little different. Given several DNA sequences, you are asked to make a shortest sequence from them so that each of the given sequence is the subsequence of it.
For example, given "ACGT","ATGC","CGTT" and "CAGT", you can make a sequence in the following way. It is the shortest but may be not the only one.
For example, given "ACGT","ATGC","CGTT" and "CAGT", you can make a sequence in the following way. It is the shortest but may be not the only one.
InputThe first line is the test case number t. Then t test cases follow. In each case, the first line is an integer n ( 1<=n<=8 ) represents number of the DNA sequences. The following k lines contain the k sequences, one per line. Assuming that the length of any sequence is between 1 and 5.OutputFor each test case, print a line containing the length of the shortest sequence that can be made from these sequences.Sample Input
1 4 ACGT ATGC CGTT CAGTSample Output
8
题意:从n个串中找出一个最短的公共串
#include<iostream> #include<cstring> #include<cstdio> using namespace std; const int MAXN=10; const int inf=1e9; int n,m; char s[MAXN][MAXN];//记录字符串 int sl[MAXN];//记录字符串长度 int point[MAXN];//记录字符串匹配到哪了 char DNA[]="AGCT"; int check() { int res=0; for(int i=0;i<n;i++) { res=max(res,sl[i]-point[i]); } return res; } int flag; void dfs(int sum) { int c=check();//如果找到了解 if(!c) { flag=1; return; } if(sum<c) //当前比原字符串短则不可能符合条件 return ; int temp[10]; for(int i=0;i<n;i++)//保存现场 temp[i]=point[i]; //搜索开始 bool ok=0;//表示是否有变化 for(int i=0;i<4;i++)//枚举添加上字符串 { for(int j=0;j<n;j++)//更新point状态 { if(s[j][point[j]]==DNA[i])//如果某一位和已知字符串匹配了 { point[j]++;//修改指针去下一个 ok=1; } } if(ok)//如果更新了 { dfs(sum-1);//继续枚举下一个字符 if(flag) return ; for(int j=0;j<n;j++) point[j]=temp[j]; } } } int main() { int t; scanf("%d",&t); while(t--) { scanf("%d",&n); int ans=0; for(int i=0;i<n;i++) { scanf("%s",s[i]); sl[i]=strlen(s[i]);//sl数组记录每一个字符串长度 point[i]=0;//将记录数组的这一位初始化 ans=max(ans,sl[i]);//记录最长的字符串长度 } flag=0; while(true) { dfs(ans); if(flag) break; ans++;//没找到下一次字符串长度++ } printf("%d\n",ans); } return 0; }

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